Kenyon, Cynthia, and Coleen Murphy. (2006) 2006. “Enrichment of Regulatory Motifs Upstream of Predicted DAF-16 Targets.”. Nat Genet 38 (4): 397-8; author reply 398. doi:10.1038/ng0406-397.

Chikina, Maria, Curtis Huttenhower, Coleen Murphy, and Olga Troyanskaya. (2009) 2009. “Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in Caenorhabditis Elegans.”. PLoS Comput Biol 5 (6): e1000417. doi:10.1371/journal.pcbi.1000417.