Publications Search

95 Publications

A

Arey, Rachel, Geneva Stein, Rachel Kaletsky, Amanda Kauffman, and Coleen Murphy. 2018. “Activation of G Signaling Enhances Memory Consolidation and Slows Cognitive Decline.”. Neuron 98 (3): 562-574.e5. doi:10.1016/j.neuron.2018.03.039.
Arey, RN, R. Kaletsky, and CT Murphy. 2019. “Nervous System-Wide Profiling of Presynaptic MRNAs Reveals Regulators of Associative Memory”. Sci Rep, 9.
Arey, Rachel, and Coleen Murphy. 2017. “Conserved Regulators of Cognitive Aging: From Worms to Humans.”. Behav Brain Res 322 (Pt B): 299-310. doi:10.1016/j.bbr.2016.06.035.
Arey, Rachel, Rachel Kaletsky, and Coleen Murphy. 2019. “Profiling of Presynaptic MRNAs Reveals a Role for Axonal PUMILIOs in Associative Memory Formation”. BioRxiv. Cold Spring Harbor Laboratory. doi:10.1101/733428.

B

Blackstone, Craig, and Coleen Murphy. 2012. “Cell Biology of Disease and Aging: A Two-Way Street”. Molecular Biology of the Cell 23: 975-75. doi:10.1091/mbc.e11-12-0985.

C

Caudy, Amy, Yuanfang Guan, Yue Jia, Christina Hansen, Chris DeSevo, Alicia Hayes, Joy Agee, Juan Alvarez-Dominguez, Hugo Arellano, Daniel Barrett, Cynthia Bauerle, Namita Bisaria, Patrick Bradley, Scott Breunig, Erin Bush, David Cappel, Emily Capra, Walter Chen, John Clore, Peter Combs, Christopher Doucette, Olukunle Demuren, Peter Fellowes, Sam Freeman, Evgeni Frenkel, Daniel Gadala-Maria, Richa Gawande, David Glass, Samuel Grossberg, Anita Gupta, Latanya Hammonds-Odie, Aaron Hoisos, Jenny Hsi, Yu-Han Hsu, Sachi Inukai, Konrad Karczewski, Xiaobo Ke, Mina Kojima, Samuel Leachman, Danny Lieber, Anna Liebowitz, Julia Liu, Yufei Liu, Trevor Martin, Jose Mena, Rosa Mendoza, Cameron Myhrvold, Christian Millian, Sarah Pfau, Sandeep Raj, Matt Rich, Joe Rokicki, William Rounds, Michael Salazar, Matthew Salesi, Rajani Sharma, Sanford Silverman, Cara Singer, Sandhya Sinha, Max Staller, Philip Stern, Hanlin Tang, Sharon Weeks, Maxwell Weidmann, Ashley Wolf, Carmen Young, Jie Yuan, Christopher Crutchfield, Megan McClean, Coleen Murphy, Manuel Llinás, David Botstein, Olga Troyanskaya, and Maitreya Dunham. (2013) 2013. “A New System for Comparative Functional Genomics of Saccharomyces Yeasts.”. Genetics 195 (1): 275-87. doi:10.1534/genetics.113.152918.
Chikina, Maria, Curtis Huttenhower, Coleen Murphy, and Olga Troyanskaya. (2009) 2009. “Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in Caenorhabditis Elegans.”. PLoS Comput Biol 5 (6): e1000417. doi:10.1371/journal.pcbi.1000417.
Choi, L.S, C. Shi, and CT Murphy. (2020) 2020. “6. Oleic Acid Protects Caenorhabditis Mothers from Mating-Induced Death”. BioRxiv .
Choi, L, C Shi, J Ashraf, S. Sohrabi, and CT. Murphy. (2022) 2021. “8. Oleic Acid Protects Caenorhabditis Mothers From Mating-Induced Death and the Cost of Reproduction”. Frontiers in Cell and Developmental Biology Front. Cell & Dev Biol 9, 1430 .
Crocker, Amanda, Xiao-Juan Guan, Coleen Murphy, and Mala Murthy. 2016. “Cell-Type-Specific Transcriptome Analysis in the Drosophila Mushroom Body Reveals Memory-Related Changes in Gene Expression.”. Cell Rep 15 (7): 1580-96. doi:10.1016/j.celrep.2016.04.046.

D

de Abreu, Diana, Antonio Caballero, Pascal Fardel, Nicholas Stroustrup, Zhunan Chen, Kyunghwa Lee, William Keyes, Zachary Nash, Isaac López-Moyado, Federico Vaggi, Astrid Cornils, Martin Regenass, Anca Neagu, Ivan Ostojic, Chang Liu, Yongmin Cho, Deniz Sifoglu, Yu Shen, Walter Fontana, Hang Lu, Attila Csikasz-Nagy, Coleen Murphy, Adam Antebi, Eric Blanc, Javier Apfeld, Yun Zhang, Joy Alcedo, and Queelim Ch’ng. (2014) 2014. “An Insulin-to-Insulin Regulatory Network Orchestrates Phenotypic Specificity in Development and Physiology.”. PLoS Genet 10 (3): e1004225. doi:10.1371/journal.pgen.1004225.
DiLoreto, Race, and Coleen Murphy. 2015. “The Cell Biology of Aging.”. Mol Biol Cell 26 (25): 4524-31. doi:10.1091/mbc.E14-06-1084.

E

Ewald, Collin, Jess Landis, Jess Abate, Coleen Murphy, and Keith Blackwell. 2015. “Dauer-Independent Insulin IGF-1-Signalling Implicates Collagen Remodelling in Longevity.”. Nature 519 (7541): 97-101. doi:10.1038/nature14021.

H

Hahm, Jeong-Hoon, Sunhee Kim, Race DiLoreto, Cheng Shi, Seung-Jae Lee, Coleen Murphy, and Hong Nam. 2015. “C. Elegans Maximum Velocity Correlates With Healthspan and Is Maintained in Worms With an Insulin Receptor Mutation.”. Nat Commun 6: 8919. doi:10.1038/ncomms9919.
Heimbucher, T, J Hog, and CT Murphy. 2019. “PQM-1 Controls Hypoxic Survival via Regulation of Lipid Metabolism”. BioRxiv.
Heimbucher, T, J. Hog, P. Gupta, and CT Murphy. (2020) 2020. “2. PQM-1 Controls Hypoxic Survival via Regulation of Lipid Metabolism”. Nature Commun.
Heimbucher, T, and CT Murphy. 2019. “A PBX MEIS Complex Balances Reproduction and Somatic Resilience”. Developmental Cell 49 (2).
Heimbucher, Thomas, and Coleen Murphy. (2019) 2019. “Investigating Mechanisms That Control Ubiquitin-Mediated DAF-16 FOXO Protein Turnover.”. Methods Mol Biol 1890: 41-49. doi:10.1007/978-1-4939-8900-3_4.
Hsu, Ao-Lin, Coleen Murphy, and Cynthia Kenyon. 2003. “Regulation of Aging and Age-Related Disease by DAF-16 and Heat-Shock Factor.”. Science 300 (5622): 1142-5. doi:10.1126/science.1083701.

K

Kaletsky, Rachel, Rebecca Moore, Lance Parsons, and Coleen Murphy. 2019. “Cross-Kingdom Recognition of Bacterial Small RNAs Induces Transgenerational Pathogenic Avoidance”. BioRxiv 697888 .
Kaletsky, Rachel, Victoria Yao, April Williams, Alexi Runnels, Alicja Tadych, Shiyi Zhou, Olga Troyanskaya, and Coleen Murphy. (2018) 2018. “Transcriptome Analysis of Adult Caenorhabditis Elegans Cells Reveals Tissue-Specific Gene and Isoform Expression.”. PLoS Genet 14 (8): e1007559. doi:10.1371/journal.pgen.1007559.
Kaletsky, R., R.S. Moore, G.D Vrla, L.R. Parsons, Z. Gitai, and CT. Murphy. (2020) 2020. “9d. C. Elegans ‘read’ Bacterial Non-Coding RNA to Learn Pathogenic Avoidance”. BioRxiv .