Kaletsky, Rachel, Rebecca Moore, Lance Parsons, and Coleen Murphy. 2019. “Cross-Kingdom Recognition of Bacterial Small RNAs Induces Transgenerational Pathogenic Avoidance”. BioRxiv 697888 .

Kaletsky, Rachel, Victoria Yao, April Williams, Alexi Runnels, Alicja Tadych, Shiyi Zhou, Olga Troyanskaya, and Coleen Murphy. (2018) 2018. “Transcriptome Analysis of Adult Caenorhabditis Elegans Cells Reveals Tissue-Specific Gene and Isoform Expression.”. PLoS Genet 14 (8): e1007559. doi:10.1371/journal.pgen.1007559.

Kaletsky, R., and CT. Murphy. 2020. “Transcriptional Profiling of C. Elegans Adult Cells and Tissues With Age”. .Methods Mol Biol.. Referenced from pubmed.ncbi.nlm.nih.gov: Transcriptional Profiling of C. elegans Adult Cells and Tissues with Age.

Kaletsky, R., R.S. Moore, G.D Vrla, L.R. Parsons, Z. Gitai, and CT. Murphy. 2020. “C. Elegans ‘read’ Bacterial Non-Coding RNA to Learn Pathogenic Avoidance”. BioRxiv.

Kaletsky, Rachel, Vanisha Lakhina, Rachel Arey, April Williams, Jessica Landis, Jasmine Ashraf, and Coleen Murphy. 2016. “The C. Elegans Adult Neuronal IIS FOXO Transcriptome Reveals Adult Phenotype Regulators.”. Nature 529 (7584): 92-6. doi:10.1038/nature16483.

Kaletsky, R, RS Moore, GD Vrla, LR Parsons, Z. Gitai, and CT. Murphy. 2020. “C. Elegans Interprets Bacterial Non-Coding RNAs to Learn Pathogenic Avoidance”. Nature.

Kauffman, Amanda, Jasmine Ashraf, Ryan Corces-Zimmerman, Jessica Landis, and Coleen Murphy. 2010. “Insulin Signaling and Dietary Restriction Differentially Influence the Decline of Learning and Memory With Age.”. PLoS Biol 8 (5): e1000372. doi:10.1371/journal.pbio.1000372.

Kauffman, Amanda, Lance Parsons, Geneva Stein, Airon Wills, Rachel Kaletsky, and Coleen Murphy. 2011. “C. Elegans Positive Butanone Learning, Short-Term, and Long-Term Associative Memory Assays.”. J Vis Exp, no. 49. doi:10.3791/2490.

Kenyon, Cynthia, and Coleen Murphy. (2006) 2006. “Enrichment of Regulatory Motifs Upstream of Predicted DAF-16 Targets.”. Nat Genet 38 (4): 397-8; author reply 398. doi:10.1038/ng0406-397.

Kleemann, G, and C Murphy. 2009. “The Endocrine Regulation of Aging in Caenorhabditis Elegans.”. Mol Cell Endocrinol 299 (1): 51-7. doi:10.1016/j.mce.2008.10.048.

Lakhina, Vanisha, Melanie McReynolds, Daniel Grimes, Joshua Rabinowitz, Rebecca Burdine, and Coleen Murphy. 2019. “ZIP-5/BZIP/Transcription/Factor/Regulation/of/Folate/Metabolism/Is/Critical/for/Aging/Axon/Regeneration”. BioRxiv, 727719. Referenced from biorxiv.org: ZIP-5/bZIP transcription factor regulation of folate metabolism is critical for aging axon regeneration.

Lakhina, Vanisha, Rachel Arey, Rachel Kaletsky, Amanda Kauffman, Geneva Stein, William Keyes, Daniel Xu, and Coleen Murphy. 2015. “Genome-Wide Functional Analysis of CREB Long-Term Memory-Dependent Transcription Reveals Distinct Basal and Memory Gene Expression Programs.”. Neuron 85 (2): 330-45. doi:10.1016/j.neuron.2014.12.029.

Lakhina, Vanisha, and Coleen Murphy. 2015. “For Longevity, Perception Is Everything.”. Cell 160 (5): 807-9. doi:10.1016/j.cell.2015.02.027.

Lakhina, Vanisha, and Coleen Murphy. 2015. “Genome Sequencing Fishes Out Longevity Genes.”. Cell 163 (6): 1312-3. doi:10.1016/j.cell.2015.11.040.

Landis, Jessica, and Coleen Murphy. (2010) 2010. “Integration of Diverse Inputs in the Regulation of Caenorhabditis Elegans DAF-16 FOXO.”. Dev Dyn 239 (5): 1405-12. doi:10.1002/dvdy.22244.

Lee, Seung-Jae, Coleen Murphy, and Cynthia Kenyon. (2009) 2009. “Glucose Shortens the Life Span of C. Elegans by Downregulating DAF-16 FOXO Activity and Aquaporin Gene Expression.”. Cell Metab 10 (5): 379-91. doi:10.1016/j.cmet.2009.10.003.

Lee, Y, Y Jung, DE Jeong, W Hwang, S Ham, HH Park, S Kwon, JM Ashraf, CT Murphy, and SV Lee. 2021. “Reduced Insulin IGF1 Signaling Prevents Immune Aging via ZIP-10 BZIP-Mediated Feedforward Loop.”

Lesnik, C, S Sohrabi, J.M Ashraf, R. Kaletsky, V. Cota, T. Sengupta, W. Keyes, and CT. Murphy. 2023. “Enhanced Branched-Chain Amino Acid Metabolism Improves Age-Related Reproductive Function”. BioRxiv. Referenced from www.biorxiv.org: Enhanced Branched-Chain Amino Acid Metabolism Improves Age-related Reproductive Function.

Li, Ling-Bo, Haoyun Lei, Rachel Arey, Pengpeng Li, Jianfeng Liu, Coleen Murphy, X Xu, and Kang Shen. 2016. “The Neuronal Kinesin UNC-104 KIF1A Is a Key Regulator of Synaptic Aging and Insulin Signaling-Regulated Memory.”. Curr Biol 26 (5): 605-15. doi:10.1016/j.cub.2015.12.068.

Li, Siran, Howard Stone, and Coleen Murphy. 2015. “A Microfluidic Device and Automatic Counting System for the Study of C. Elegans Reproductive Aging.”. Lab Chip 15 (2): 524-31. doi:10.1039/c4lc01028k.

Liu, Gang, Jason Rogers, Coleen Murphy, and Christopher Rongo. 2011. “EGF Signalling Activates the Ubiquitin Proteasome System to Modulate C. Elegans Lifespan.”. EMBO J 30 (15): 2990-3003. doi:10.1038/emboj.2011.195.

LM, McIntyre, Huertas F, Morse AM, Kaletsky R, Murphy CT, Kalia VC, Miller GW, Moskalenko O, Conesa A, and Mor DE. 2022. “GAIT-GM Integrative Cross-Omics Analyses Reveal Cholinergic Defects in a C. Elegans Model of Parkinson’s Disease”. Scientific Reports. Referenced from pubmed.ncbi.nlm.nih.gov: GAIT-GM integrative cross-omics analyses reveal cholinergic defects in a C. elegans model of Parkinson’s disease.

Luo, Shijing, Wendy Shaw, Jasmine Ashraf, and Coleen Murphy. (2009) 2009. “TGF-Beta Sma Mab Signaling Mutations Uncouple Reproductive Aging from Somatic Aging.”. PLoS Genet 5 (12): e1000789. doi:10.1371/journal.pgen.1000789.

Luo, Shijing, Gunnar Kleemann, Jasmine Ashraf, Wendy Shaw, and Coleen Murphy. 2010. “TGF-β and Insulin Signaling Regulate Reproductive Aging via Oocyte and Germline Quality Maintenance.”. Cell 143 (2): 299-312. doi:10.1016/j.cell.2010.09.013.

Luo, Shijing, and Coleen Murphy. (2011) 2011. “Caenorhabditis Elegans Reproductive Aging: Regulation and Underlying Mechanisms.”. Genesis 49 (2): 53-65. doi:10.1002/dvg.20694.